To Do Q

Homepage

• to add favourite current papers & projects.

other pages

Papers:

• tidy up topics and add introductions (definitions and Doyle's group approach to each topic)
• copy over papers by year to relevant "topic" pages

Group:

• to update personel present and past

Research and J. Doyle’s Bio:

• to expand and get edited by Prof. Doyle.
• group to contribute

Physiology page set up but need more content and more papers!!!

Network architecture and protocols needs editing - too long text and too general? Needs add interest with diagrams etc.,

Fix Complex networks

Add pages or create category for public website?

Find location for: <www.nsf.gov/attachments/111101/public/Doyle1NSFBio_HardLimits.ppt>

Meetings, Calendar, Tips maintenance

Students/Prof Doyle to edit/add to useful stuff to:

Tips: Research papers, Publishing and Other Trivia

Calendar to add Bio physio meetings at Caltech and related conferences, continue updating relevant CDS course links

Group Meetings keep using it for group meetings

Special:Allpages

See section below new pages copied from old pages

overall

Website needs

• have Group members update the wiki!
• more logical structure,
• definition of terminology
• define how Prof Doyle's group approaches each topic
• to define and select "categories".
• structure sections to public wanting to get into these areas of research
• consider making website easier to find now that draft is almost done!!! eg redirect or ...

Links / Access

• to add many more internal wiki links and add "categories"
• to add "Presentations" (Hana/Lun adjusted LocalSettings.phpto allow ppt or pdf upload)

• to update File permisssions last set by Lachlan and Lun July 2007.

Set up accounts:

• login then to set up separate username/passwords
  • See Help:Contents for tips on creating accounts.

and check pages: Special pages:User list; Special pages: User rights management

• • someone else in Doyle's group need to take over setting up accounts

images

• add more diagrams and images!

Other features that could be added to wiki

Case Sensitivity

To make page titles and usernames case-sensitive, added $wgCapitalLinks = false; to Local settings.php

Social networking bookmarks

http://www.mediawiki.org/wiki/Extension:ShareThis for downloads and adding social networking bookmarks like <http://digg.com/> and <http://www.reddit.com/>

Version 1.10

Upgrading to Media Wiki 1.10 version also allows Private pages to viewed by restricted members. Data and files would need to be copied over to the new wiki.

Search and bibtex

Optional to copy page source from:
http://netlab.caltech.edu/pubs_search.php
and put all papers into an array for bibtex and searching... (See array set up by David Wei and Lachlan Andrew and Hana at Netlab website)

Some one can copy code over and insert it into this wiki if this is worthwhile and not time consuming

Old webpages

http://www.cds.caltech.edu/~doyle/home.htm

http://www.cds.caltech.edu/~doyle/

new pages copied from old pages

The following pages has had text copied, reformatted and links added from Doyle's old website.

Still need to copy over old links and files/slides next and add updated information.

Wiki page	Most Content from old website page
Complexity and robustness	<http://www.cds.caltech.edu/~doyle/SFI_robustness/>
Complex_networks	<http://www.cds.caltech.edu/~doyle/CmplxNets/>
J. Doyle’s Bio J. Doyle's Bio Athletics	<http://www.cds.caltech.edu/~doyle/CV.html> <http://www.cds.caltech.edu/~doyle/CVath.html> text and photos copied to (only a few things listed for period 2000-2008 in Aug-Jul 2008)